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Microarrays: retracing steps | Nature Medicine
https://www.nature.com/articles/nm1107-1276b
Microarrays: retracing steps 1. We cannot reproduce their selection of cell lines. The most sensitive and resistant lines should be used to …
Microarrays: retracing steps.
https://www.ncbi.nlm.nih.gov/pubmed/17987014
Microarrays: retracing steps. Coombes KR, Wang J, Baggerly KA. Comment on Nat Med. 2006 Nov;12(11):1294-300. PMID: 17987014 [Indexed for MEDLINE] Publication Types: Comment; Letter; MeSH terms. Antineoplastic Combined Chemotherapy Protocols*/therapeutic use; Breast Neoplasms/chemistry; Breast Neoplasms/drug therapy* Breast Neoplasms/genetics ...
Microarrays: Retracing steps [4] — MD Anderson Cancer Center
https://mdanderson.elsevierpure.com/en/publications/microarrays-retracing-steps-4
Microarrays: Retracing steps [4] Kevin R. Coombes, Jing Wang, Keith A. Baggerly. Bioinformatics & Computational Biology; Research output: Contribution to journal › Letter › peer-review. 91 Scopus citations. Overview; Fingerprint; Original language: English (US) Pages (from-to) 1276-1277: Number of pages: 2: Journal: Nature medicine:
Reply to 'Microarrays: retracing steps' | Nature Medicine
https://www.nature.com/articles/nm1107-1277
Nature Medicine - Reply to 'Microarrays: retracing steps' We appreciate the interest that Coombes et al. 1 have shown in our reported results and agree that an algorithm that tracks the results of ...
Microarrays: Retracing steps [4] | Request PDF
https://www.researchgate.net/publication/5859804_Microarrays_Retracing_steps_4
Microarrays: Retracing steps [4] December 2007; Nature Medicine 13(11):1276-7; ... Gene expression data from microarrays are being applied to …
Microarrays: Retracing Steps (Again)
http://bioinformatics.mdanderson.org/Supplements/ReproRsch-All/Modified/HistoryOfCisPem/EmailWithNatMed/natMedLetter.pdf
Microarrays: Retracing Steps (Again) Keith A. Baggerly 1∗ and Kevin R. Coombes 1 Department of Bioinformatics & Computational Biology UT M.D. Anderson Cancer Center, Houston, TX This work was partially supported by NIH/NCI grants P50-CA116199, P50-CA070907, and P50-CA083639. ∗ To whom correspondence should be addressed: Keith A. Baggerly
DNA Microarray Steps (Procedure) and Applications
https://www.biologyexams4u.com/2014/05/dna-microarray-steps-procedure.html
DNA Microarray Procedure. 1) Collect Samples: This can be from a variety of organisms. Two samples : cancerous human skin tissue & healthy human skin tissue. 2) Isolate mRNA: Extract the RNA from the samples. Using either a column, or a solvent such as phenol-chloroform.
DNA Microarrays: An Easy Explanation for Beginners
https://bitesizebio.com/7206/introduction-to-dna-microarrays/
The first step is to isolate and purify mRNA from samples of interest. Since we are interested in comparing gene expression, one sample usually serves as a control, and another sample would be the experiment (e.g., healthy vs. disease) Reverse Transcription and Labeling. The next step is to reverse transcribe and label the mRNA.
How do Microarrays work? – EMBL ELLS
https://www.embl.org/ells/teachingbase/how-do-microarrays-work/
The virtual microarray brings cutting-edge science into the classroom by simulating the different steps that researchers take in performing microarray experiments and in analyzing their results ( Real and Virtual Microarrays: Step by Step ). Although we have tried our best to adjust the examples and illustrations in the ‘virtual microarray ...
Microarray Analysis - The Basics
https://faculty.ucr.edu/~tgirke/HTML_Presentations/Manuals/Microarray/arrayBasics.pdf
Basic Data Analysis Steps Image Processing: transform feature and background pixel into intensity values Transformations Removal of agged values (optional) Detection limit (optional) Background subtraction Taking logarithms Normalization Identify EGs and DEGs Which genes are expressed? Which genes are di erentially expressed? Cluster analysis (time series)
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